Apply Standard Quantile normalization with frozen parameters

Quantile normalization for miRNA-Seq data using the preprocessCore package. For more information, visit documentation on the preprocessCore Bioconductor page.

Usage

harmon.QN.frozen(object)

Arguments

object

A precision object containing raw data. Harmonization is applied to the slots raw.train.data, raw.test1.data, and raw.test2.data (if applicable), each containing a list with data and label elements.

Value

A precision object with QN harmonization results added to the slots harmon.train.data, harmon.test1.data, and harmon.test2.data (if applicable).

Details

This function applies quantile normalization with frozen parameters to the raw data contained in a precision object. The harmonization results are added to the corresponding slots in the object for each dataset ("train", "test1", "test2") if they exist.