Apply all classification methods to a precision object

This function applies all classification methods to the training data contained in a precision object. The classification results are added to the corresponding classification.result slot in the object for each harmonized training and testing dataset.

Usage

classification.all(object, threshold_method = "cv")

Arguments

object

A precision object containing harmonized training and testing data in the slots harmon.train.data, and harmon.test1.data and harmon.test2.data, respectively.

threshold_method

A character string specifying the thresholding method. Options are: - "cv": Use cross-validation to optimize the threshold. - "none": Use all genes without applying a threshold.

Value

Updated precision object with all classification results added to the classification.result slot.